Mnemonic

Molecular Tumour Testing

A memory aid for the predictive biomarkers tested on tumour tissue.

Expansion

Testing that determines which targeted treatment will work

Expansion

Marker Tumour Determines
HER2 Breast, gastric Trastuzumab and related agents
ER and PR Breast Endocrine therapy
EGFR mutation Lung adenocarcinoma Tyrosine kinase inhibitors
ALK and ROS1 rearrangement Lung Targeted inhibitors
KRAS or NRAS mutation Colorectal Predicts failure of cetuximab
BRAF V600E Melanoma, colorectal BRAF and MEK inhibitors
BRCA1 and BRCA2 Ovarian, breast, prostate PARP inhibitors, and family screening
MSI or mismatch repair loss Colorectal, endometrial Immunotherapy, and Lynch syndrome screening
PD-L1 expression Lung, others Checkpoint inhibitors
1p/19q codeletion Oligodendroglioma Chemosensitivity and prognosis
Philadelphia chromosome (BCR-ABL) CML, ALL Imatinib and successors

Predictive versus prognostic

  • Predictive: tells you whether a particular treatment will work. HER2, EGFR and RAS are predictive
  • Prognostic: tells you the likely outcome regardless of treatment. Stage and grade are prognostic

Some markers are both, which is a frequent source of confusion in reporting.

Universal testing now applies to some markers regardless of family history: mismatch repair testing in all colorectal and endometrial cancers, because it identifies Lynch syndrome, which has implications for surveillance and for the patient’s relatives.

Liquid biopsy, detecting circulating tumour DNA in plasma, is increasingly used where tissue is unobtainable, for resistance mutations at progression, and for monitoring minimal residual disease. A negative result does not exclude the mutation, since shedding varies, so tissue remains the reference.